include Directory Reference

Files

file  BamIndex.h [code]
file  BamInterface.h [code]
file  BaseAsciiMap.h [code]
file  BaseComposition.h [code]
file  BaseCount.h [code]
file  BaseQualityHelper.h [code]
file  BaseUtilities.h [code]
file  BasicHash.h [code]
file  BgzfFileType.h [code]
file  CharBuffer.h [code]
file  Cigar.h [code]
file  CigarRoller.h [code]
file  Constant.h [code]
file  Error.h [code]
file  ErrorHandler.h [code]
file  FastQ.h [code]
file  FastQFile.h [code]
file  FastQStatus.h [code]
file  FileType.h [code]
file  FortranFormat.h [code]
file  Generic.h [code]
file  GenericSamInterface.h [code]
file  GenomeSequence.h [code]
file  GenotypeLists.h [code]
file  GlfException.h [code]
file  GlfFile.h [code]
file  glfHandler.h [code]
file  GlfHeader.h [code]
file  GlfRecord.h [code]
file  GlfRefSection.h [code]
file  GlfStatus.h [code]
file  GreedyTupleAligner.h [code]
file  GzipFileType.h [code]
file  GzipHeader.h [code]
file  Hash.h [code]
file  InplaceMerge.h [code]
file  Input.h [code]
file  InputFile.h [code]
file  IntArray.h [code]
file  IntHash.h [code]
file  LongHash.h [code]
file  LongInt.h [code]
file  LongLongCounter.h [code]
file  MapFunction.h [code]
file  MathConstant.h [code]
file  MathMatrix.h [code]
file  MathVector.h [code]
file  MemoryAllocators.h [code]
file  MemoryInfo.h [code]
file  MemoryMap.h [code]
file  MemoryMapArray.h [code]
file  MiniDeflate.h [code]
file  Parameters.h [code]
file  Pedigree.h [code]
file  PedigreeAlleleFreq.h [code]
file  PedigreeAlleles.h [code]
file  PedigreeDescription.h [code]
file  PedigreeFamily.h [code]
file  PedigreeGlobals.h [code]
file  PedigreePerson.h [code]
file  Pileup.h [code]
file  PileupElement.h [code]
file  PileupElementBaseQual.h [code]
file  PileupReader.h [code]
file  QuickIndex.h [code]
file  Random.h [code]
file  SamFile.h [code]
file  SamFileHeader.h [code]
file  SamFilter.h [code]
file  SamFlag.h [code]
file  SamHeaderHD.h [code]
file  SamHeaderPG.h [code]
file  SamHeaderRecord.h [code]
file  SamHeaderRG.h [code]
file  SamHeaderSQ.h [code]
file  SamHeaderTag.h [code]
file  SamInterface.h [code]
file  SamQuerySeqWithRefHelper.h [code]
file  SamRecord.h [code]
file  SamReferenceInfo.h [code]
file  SamStatistics.h [code]
file  SamStatus.h [code]
file  SamValidation.h [code]
file  SimpleStats.h [code]
file  SmithWaterman.h [code]
file  Sort.h [code]
file  STLUtilities.h [code]
file  String.h [code]
file  StringArray.h [code]
file  StringBasics.h [code]
file  StringHash.h [code]
file  StringMap.h [code]
file  TrimSequence.h [code]
file  UncompressedFileType.h [code]
file  WindowsHelper.h [code]
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