SeqShop: June 2014

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Sequence Analysis Workshop June 16-20, 2014: http://seqshop.sph.umich.edu/


Note: new versions of these practicals are available at: SeqShop: December 2014

  • The ones here are the original ones from the June workshop (updated to be run from elsewhere)
Monday Lecture Practical
Design of Human Genetic Studies Interacting with Sequence Data
Sequence Mapping and Assembly SeqShop: Sequence Mapping and Assembly Practical, June 2014
Tuesday Lecture Practical
Variant Calling and Filtering for SNPs SeqShop: Variant Calling and Filtering for SNPs Practical, June 2014
Variant Calling and Filtering for INDELs SeqShop: Variant Calling and Filtering for INDELs Practical, June 2014
Wednesday Lecture Practical
Analysis of Structural Variation - Part 1

Analysis of Structural Variation - Part 2

SeqShop: Analysis of Structural Variation Practical, June 2014

SeqShop: Aligning Your Own Genome, June 2014

Thursday Lecture Practical
Estimates of Genetic Ancestry SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Genetic Association Analysis SeqShop: Genetic Association Analysis Practical, June 2014
Friday Lecture Practical
Example of a Whole Genome Association Study SeqShop: Friday - Practicing what we learned, June 2014
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