ThunderVCF

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This a modified version of MACH, designed for the accurate genotyping of low pass sequence data from unrelated individuals and included in the UMAKE download.

The tool requires a VCF file including genotype likelihoods as input and produces a refined VCF file with refined genotypes as output. For an example of how it works, see our Tutorial: Low Pass Sequence Analysis.

Retrieved from "http://genome.sph.umich.edu/w/index.php?title=ThunderVCF&oldid=4327"