http://genome.sph.umich.edu/w/api.php?action=feedcontributions&feedformat=atom&user=Wpgilks 2026-09-25T02:17:59Z User contributions MediaWiki 1.43.1 http://genome.sph.umich.edu/w/index.php?title=Talk:Code_Sample:_Generating_Manhattan_Plots_in_R&diff=9358 2014-01-14T18:40:01Z

<p>Wpgilks: x-axis padding</p> <hr /> <div>Gene annotations at the edges of the plot can be cut-off. To prevent this, padding can be added at each end of the x-axis using:<br /> <br /> mhplot&lt;-manhattan.plot(cleaned$chr, cleaned$pos, cleaned$pvalue, annotate=ann)<br /> mhplot$x.limits&lt;-mhplot$x.limits+10*c(-10,10)<br /> print(mhplot)<br /> <br /> Thanks for the code and the tip Matthew :)</div>

Wpgilks