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Here is a list of all documented class members with links to the class documentation for each member:
- g -
GenerateStatistics() :
SamFile
GenomeSequence() :
GenomeSequence
getBases() :
SequenceCoverageReader
getChromosome() :
GenomeSequence
getChromosomeCount() :
GenomeSequence
getChromosomeSize() :
GenomeSequence
getChromosomeStart() :
GenomeSequence
getChunksForRegion() :
BamIndex
GetCurrentRecordCount() :
SamFile
getCurrentRecordCount() :
GlfFile
getDataPtr() :
GenomeSequence
getExpandedString() :
Cigar
getExpectedQueryBaseCount() :
Cigar
getExpectedReferenceBaseCount() :
Cigar
GetFailure() :
SamFile
getFailure() :
GlfFile
getGenomePosition() :
GenomeSequence
getHeaderTextString() :
GlfHeader
getIndel1() :
GlfRecord
getIndel2() :
GlfRecord
getLk() :
GlfRecord
getLkHet() :
GlfRecord
getLkHom1() :
GlfRecord
getLkHom2() :
GlfRecord
getMinDepth() :
GlfRecord
getMinLk() :
GlfRecord
getMismatchCount() :
GenomeSequence
getName() :
GlfRefSection
getNextRecord() :
GlfFile
getNextRefSection() :
GlfFile
getNumBeginClips() :
Cigar
getNumberBases() :
GenomeSequence
getNumEndClips() :
Cigar
GetNumOverlaps() :
SamFile
getNumRefs() :
BamIndex
getOffset() :
GlfRecord
getQualities() :
ReadInsertion
getReadDepth() :
GlfRecord
getRecordType() :
GlfRecord
getRefBase() :
GlfRecord
getRefBaseChar() :
GlfRecord
getReferenceMinMax() :
BamIndex
getRefLen() :
GlfRefSection
getRmsMapQ() :
GlfRecord
GetStatus() :
SamFile
getStatus() :
GlfFile
,
GlfStatus
getStatusMessage() :
GlfFile
,
GlfStatus
GetStatusMessage() :
SamFile
getStatusString() :
GlfStatus
getSumQ() :
GenomeSequence
GlfException() :
GlfException
GlfFile() :
GlfFile
GlfFileReader() :
GlfFileReader
GlfFileWriter() :
GlfFileWriter
GlfHeader() :
GlfHeader
GlfRecord() :
GlfRecord
GlfRefSection() :
GlfRefSection
GlfStatus() :
GlfStatus
Generated on Wed Nov 17 13:24:05 2010 for StatGen Software by
1.6.3