http://genome.sph.umich.edu/w/index.php?action=history&feed=atom&title=830_-_MaqIndex%3A%3AGetWord%28%29 2026-09-29T03:04:01Z Revision history for this page on the wiki MediaWiki 1.43.1 http://genome.sph.umich.edu/w/index.php?title=830_-_MaqIndex::GetWord()&diff=8895&oldid=prev 2013-10-28T17:39:35Z

<p>Created page with &quot;&lt;source lang=&quot;cpp&quot;&gt; long long MaqIndex::GetWord(String &amp; sequence, unsigned int position) { long long word = 0; if (position + mask.Length() &gt; sequence.Length()) return -...&quot;</p> <p><b>New page</b></p><div>&lt;source lang=&quot;cpp&quot;&gt;<br /> long long MaqIndex::GetWord(String &amp; sequence, unsigned int position)<br /> {<br /> long long word = 0;<br /> <br /> if (position + mask.Length() &gt; sequence.Length())<br /> return -1;<br /> <br /> for (unsigned int i = 0; i &lt; mask.Length(); i++)<br /> if (mask[i] == &#039;1&#039;)<br /> {<br /> char base = sequence[position + i];<br /> <br /> if (base &lt; 1 || base &gt; 4) return -1;<br /> <br /> word = word * 4 + base - 1;<br /> }<br /> <br /> return word;<br /> }<br /> <br /> long long MaqIndex::GetReferenceWord(unsigned int position)<br /> {<br /> return GetWord(reference, position);<br /> }<br /> &lt;/source&gt;</div>

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