SeqShop: June 2014 - Revision history

Mktrost at 18:21, 13 November 2014

2014-11-13T18:21:45Z

Mktrost: Mktrost moved page SeqShop to SeqShop: June 2014: Multiple SeqShops

2014-11-13T18:04:10Z

Mktrost moved page SeqShop to SeqShop: June 2014: Multiple SeqShops

← Older revision	Revision as of 14:04, 13 November 2014
(No difference)

Mktrost at 01:20, 23 July 2014

2014-07-23T01:20:28Z

← Older revision		Revision as of 21:20, 22 July 2014
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	\|-		\|-
	\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]		\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]
	\| [[SeqShop: Friday - Practicing what we learned]]		\| ''[[SeqShop: Friday - Practicing what we learned]]''
	\|}		\|}

Mktrost at 01:20, 23 July 2014

2014-07-23T01:20:00Z

← Older revision		Revision as of 21:20, 22 July 2014
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	\| [[SeqShop: Genetic Association Analysis Practical]]		\| [[SeqShop: Genetic Association Analysis Practical]]
	\|-		\|-
	! ~~colspan~~="2" style="background:#ABE" \| ~~Friday~~		! style="background:#ABE" \| Friday Lecture !! style="background:#ABE" \| Practical
	\|-		\|-
	\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]		\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]
	\| [[SeqShop: Friday - Practicing what we learned]]		\| [[SeqShop: Friday - Practicing what we learned]]
	\|}		\|}

Mktrost at 14:11, 18 July 2014

2014-07-18T14:11:05Z

← Older revision		Revision as of 10:11, 18 July 2014
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	! colspan="2" style="background:#ABE" \| Friday		! colspan="2" style="background:#ABE" \| Friday
	\|-		\|-
	~~\| colspan="2"\| [[SeqShop: Friday - Practicing what we learned]]~~		\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]
	\|-		\| [[SeqShop: Friday - Practicing what we learned]]
	~~\| colspan="2"~~\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]
	\|}		\|}

Mktrost at 14:04, 18 July 2014

2014-07-18T14:04:21Z

← Older revision		Revision as of 10:04, 18 July 2014
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	Sequence Analysis Workshop June 16-20, 2014		Sequence Analysis Workshop June 16-20, 2014: http://seqshop.sph.umich.edu/

	{\| class="wikitable" cellpadding=5		{\| class="wikitable" cellpadding=5

Mktrost at 13:26, 10 July 2014

2014-07-10T13:26:10Z

← Older revision		Revision as of 09:26, 10 July 2014
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	[[Media:Seqshop_cnv_partb_2014_06.pdf\|Analysis of Structural Variation - Part 2]]		[[Media:Seqshop_cnv_partb_2014_06.pdf\|Analysis of Structural Variation - Part 2]]
	\| [[SeqShop: Analysis of Structural Variation Practical]]		\| [[SeqShop: Analysis of Structural Variation Practical]]
	[[SeqShop: Aligning Your Own Genome]]		''[[SeqShop: Aligning Your Own Genome]]''
	\|-		\|-
	! style="background:#ABE" \| Thursday Lecture !! style="background:#ABE" \| Practical		! style="background:#ABE" \| Thursday Lecture !! style="background:#ABE" \| Practical

Goncalo at 15:06, 20 June 2014

2014-06-20T15:06:15Z

← Older revision		Revision as of 11:06, 20 June 2014
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	\|-		\|-
	\| [[Media:2014.06_-_Abecasis_Workshop_Introduction.pdf\|Design of Human Genetic Studies]]		\| [[Media:2014.06_-_Abecasis_Workshop_Introduction.pdf\|Design of Human Genetic Studies]]
	\| [[http://iobio.io Interacting with Sequence Data]]		\| [http://iobio.io Interacting with Sequence Data]
	\|-		\|-
	\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]		\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]

Goncalo at 15:05, 20 June 2014

2014-06-20T15:05:58Z

← Older revision		Revision as of 11:05, 20 June 2014
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	\|-		\|-
	\| [[Media:2014.06_-_Abecasis_Workshop_Introduction.pdf\|Design of Human Genetic Studies]]		\| [[Media:2014.06_-_Abecasis_Workshop_Introduction.pdf\|Design of Human Genetic Studies]]
	\| [http://iobio.io\|Interacting with Sequence Data]		\| [[http://iobio.io Interacting with Sequence Data]]
	\|-		\|-
	\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]		\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]

Goncalo at 15:04, 20 June 2014

2014-06-20T15:04:59Z

← Older revision		Revision as of 11:04, 20 June 2014
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	\|-		\|-
	\| [[Media:2014.06_-_Abecasis_Workshop_Introduction.pdf\|Design of Human Genetic Studies]]		\| [[Media:2014.06_-_Abecasis_Workshop_Introduction.pdf\|Design of Human Genetic Studies]]
	\| [~~[SeqShop~~: ~~Design of Human Genetic Studies Practical]~~]		\| [http://iobio.io\|Interacting with Sequence Data]
	\|-		\|-
	\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]		\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]
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	\|-		\|-
	\| colspan="2"\| [[SeqShop: Friday - Practicing what we learned]]		\| colspan="2"\| [[SeqShop: Friday - Practicing what we learned]]
			\|-
			\| colspan="2"\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]
	\|}		\|}

← Older revision		Revision as of 14:21, 13 November 2014
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	Sequence Analysis Workshop June 16-20, 2014: http://seqshop.sph.umich.edu/		'''Sequence Analysis Workshop June 16-20, 2014: http://seqshop.sph.umich.edu/ '''


			'''Note:''' new versions of these practicals are available at: [[SeqShop: December 2014]]
			* The ones here are the original ones from the June workshop (updated to be run from elsewhere)

	{\| class="wikitable" cellpadding=5		{\| class="wikitable" cellpadding=5
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	\|-		\|-
	\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]		\| [[Media:Mapping and assembly.pdf\|Sequence Mapping and Assembly]]
	\| [[SeqShop: Sequence Mapping and Assembly Practical]]		\| [[SeqShop: Sequence Mapping and Assembly Practical, June 2014]]
	\|-		\|-
	! style="background:#ABE" \| Tuesday Lecture !! style="background:#ABE" \| Practical		! style="background:#ABE" \| Tuesday Lecture !! style="background:#ABE" \| Practical
	\|-		\|-
	\| [[Media:SNPcalling.pdf\|Variant Calling and Filtering for SNPs]]		\| [[Media:SNPcalling.pdf\|Variant Calling and Filtering for SNPs]]
	\| [[SeqShop: Variant Calling and Filtering for SNPs Practical]]		\| [[SeqShop: Variant Calling and Filtering for SNPs Practical, June 2014]]
	\|-		\|-
	\| [[Media:Variant_Calling_and_Filtering_for_INDELs.pdf\|Variant Calling and Filtering for INDELs]]		\| [[Media:Variant_Calling_and_Filtering_for_INDELs.pdf\|Variant Calling and Filtering for INDELs]]
	\| [[SeqShop: Variant Calling and Filtering for INDELs Practical]]		\| [[SeqShop: Variant Calling and Filtering for INDELs Practical, June 2014]]
	\|-		\|-
	! style="background:#ABE" \| Wednesday Lecture !! style="background:#ABE" \| Practical		! style="background:#ABE" \| Wednesday Lecture !! style="background:#ABE" \| Practical
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	\| [[Media:Analysis of SV.pdf\|Analysis of Structural Variation - Part 1]]		\| [[Media:Analysis of SV.pdf\|Analysis of Structural Variation - Part 1]]
	[[Media:Seqshop_cnv_partb_2014_06.pdf\|Analysis of Structural Variation - Part 2]]		[[Media:Seqshop_cnv_partb_2014_06.pdf\|Analysis of Structural Variation - Part 2]]
	\| [[SeqShop: Analysis of Structural Variation Practical]]		\| [[SeqShop: Analysis of Structural Variation Practical, June 2014]]
	''[[SeqShop: Aligning Your Own Genome]]''		''[[SeqShop: Aligning Your Own Genome, June 2014]]''
	\|-		\|-
	! style="background:#ABE" \| Thursday Lecture !! style="background:#ABE" \| Practical		! style="background:#ABE" \| Thursday Lecture !! style="background:#ABE" \| Practical
	\|-		\|-
	\| [[Media:Worshop2014-ancestry.pdf\|Estimates of Genetic Ancestry]]		\| [[Media:Worshop2014-ancestry.pdf\|Estimates of Genetic Ancestry]]
	\| [[SeqShop: Estimates of Genetic Ancestry Practical]]		\| [[SeqShop: Estimates of Genetic Ancestry Practical, June 2014]]
	\|-		\|-
	\| [[Media:Seqshop_cnv_partb_2014_06.pdf\|Genetic Association Analysis]]		\| [[Media:Seqshop_cnv_partb_2014_06.pdf\|Genetic Association Analysis]]
	\| [[SeqShop: Genetic Association Analysis Practical]]		\| [[SeqShop: Genetic Association Analysis Practical, June 2014]]
	\|-		\|-
	! style="background:#ABE" \| Friday Lecture !! style="background:#ABE" \| Practical		! style="background:#ABE" \| Friday Lecture !! style="background:#ABE" \| Practical
	\|-		\|-
	\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]		\| [[Media:2014.06_-_Workshop_Closing.pdf\|Example of a Whole Genome Association Study]]
	\| ''[[SeqShop: Friday - Practicing what we learned]]''		\| ''[[SeqShop: Friday - Practicing what we learned, June 2014]]''
	\|}		\|}