GotCloud: Alignment Pipeline: Revision history

28 January 2016

• curprev 18:3918:39, 28 January 2016 Mktrost talk contribs 12,941 bytes +257 →Optional Configurable Settings

26 February 2015

• curprev 14:1114:11, 26 February 2015 Mktrost talk contribs 12,684 bytes +329 →Recommended Settings

7 January 2015

• curprev 11:3911:39, 7 January 2015 Mktrost talk contribs 12,355 bytes +189 →Configuration File

23 October 2014

• curprev 18:0218:02, 23 October 2014 Mktrost talk contribs 12,166 bytes −1,073 →Configuration File
• curprev 14:0414:04, 23 October 2014 Mktrost talk contribs 13,239 bytes −360 →Reference Files
• curprev 10:3510:35, 23 October 2014 Mktrost talk contribs 13,599 bytes +55 →Reference Files
• curprev 10:0410:04, 23 October 2014 Mktrost talk contribs 13,544 bytes +1 →Alignment Pipeline Output

22 October 2014

• curprev 16:5016:50, 22 October 2014 Mktrost talk contribs 13,543 bytes +1,197 →Alignment Pipeline Output
• curprev 16:4016:40, 22 October 2014 Mktrost talk contribs 12,346 bytes +851 →Running the Alignment Pipeline

19 October 2014

• curprev 18:3718:37, 19 October 2014 Mktrost talk contribs 11,495 bytes +140 →Reference Files
• curprev 18:3418:34, 19 October 2014 Mktrost talk contribs 11,355 bytes −9 →Required Settings
• curprev 18:3218:32, 19 October 2014 Mktrost talk contribs 11,364 bytes +159 →Turning Off Optional Steps
• curprev 18:3018:30, 19 October 2014 Mktrost talk contribs 11,205 bytes −145 →Reference Files
• curprev 18:2218:22, 19 October 2014 Mktrost talk contribs 11,350 bytes +391 →FASTQ List File
• curprev 18:1618:16, 19 October 2014 Mktrost talk contribs 10,959 bytes +156 →Optional Configurable Settings
• curprev 18:1318:13, 19 October 2014 Mktrost talk contribs 10,803 bytes +1,156 →Command-Line Options
• curprev 17:4917:49, 19 October 2014 Mktrost talk contribs 9,647 bytes +282 →Running the GotCloud Alignment Pipeline

14 October 2014

• curprev 22:5022:50, 14 October 2014 Mktrost talk contribs 9,365 bytes +163 →Input Data:

15 May 2014

• curprev 17:4817:48, 15 May 2014 Mktrost talk contribs 9,202 bytes −71 No edit summary
• curprev 17:4417:44, 15 May 2014 Mktrost talk contribs 9,273 bytes +324 →Running the GotCloud Alignment Pipeline
• curprev 17:4117:41, 15 May 2014 Mktrost talk contribs 8,949 bytes +113 →Running the GotCloud Alignment Pipeline
• curprev 17:3817:38, 15 May 2014 Mktrost talk contribs 8,836 bytes +91 No edit summary

24 January 2014

• curprev 12:0312:03, 24 January 2014 Mktrost talk contribs 8,745 bytes −123 No edit summary

21 June 2013

• curprev 16:3716:37, 21 June 2013 Ben Lerch talk contribs 8,868 bytes +202 →Optional Configurable Settings
• curprev 16:3116:31, 21 June 2013 Ben Lerch talk contribs 8,666 bytes +106 →Command-Line Options
• curprev 16:2916:29, 21 June 2013 Ben Lerch talk contribs 8,560 bytes −2 →Command-Line Options

10 May 2013

• curprev 14:0514:05, 10 May 2013 Mktrost talk contribs 8,562 bytes −8 →Running the Alignment Pipeline

18 March 2013

• curprev 17:0217:02, 18 March 2013 Mktrost talk contribs m 8,570 bytes 0 moved Alignment Pipeline to GotCloud: Alignment Pipeline

7 March 2013

• curprev 13:0813:08, 7 March 2013 Mktrost talk contribs m 8,570 bytes 0 moved Mapping Pipeline to Alignment Pipeline over redirect
• curprev 13:0813:08, 7 March 2013 Mktrost talk contribs 8,570 bytes +27 No edit summary

21 February 2013

• curprev 00:0100:01, 21 February 2013 Mktrost talk contribs 8,543 bytes +15 No edit summary

20 February 2013

• curprev 23:5623:56, 20 February 2013 Mktrost talk contribs 8,528 bytes +701 No edit summary

8 January 2013

• curprev 02:0402:04, 8 January 2013 Amkwong talk contribs m 7,827 bytes 0 No edit summary
• curprev 02:0202:02, 8 January 2013 Amkwong talk contribs m 7,827 bytes +2 No edit summary

28 November 2012

• curprev 11:3811:38, 28 November 2012 Terry Gliedt talk contribs 7,825 bytes −38 No edit summary
• curprev 11:1111:11, 28 November 2012 Terry Gliedt talk contribs 7,863 bytes −10 No edit summary

27 November 2012

• curprev 12:0712:07, 27 November 2012 Terry Gliedt talk contribs 7,873 bytes +10 →Step 1: Generate the Makefiles, 1 per sample

20 November 2012

• curprev 15:0515:05, 20 November 2012 Mktrost talk contribs 7,863 bytes +1 →Running the Mapping Pipeline

7 November 2012

• curprev 02:1402:14, 7 November 2012 Mktrost talk contribs 7,862 bytes −1 →Running the Mapping Pipeline
• curprev 02:1302:13, 7 November 2012 Mktrost talk contribs 7,863 bytes +14 No edit summary
• curprev 02:1202:12, 7 November 2012 Mktrost talk contribs 7,849 bytes +5,051 No edit summary

6 November 2012

• curprev 13:3413:34, 6 November 2012 Mktrost talk contribs m 2,798 bytes 0 moved Alignment Pipeline to Mapping Pipeline

5 November 2012

• curprev 23:4923:49, 5 November 2012 Mktrost talk contribs 2,798 bytes +344 No edit summary
• curprev 21:5921:59, 5 November 2012 Mktrost talk contribs 2,454 bytes +387 No edit summary
• curprev 16:1116:11, 5 November 2012 Mktrost talk contribs 2,067 bytes +1,843 No edit summary

30 October 2012

• curprev 18:4918:49, 30 October 2012 Mktrost talk contribs 224 bytes +9 No edit summary

29 October 2012

• curprev 10:1510:15, 29 October 2012 Terry Gliedt talk contribs 215 bytes +3 No edit summary
• curprev 10:1310:13, 29 October 2012 Terry Gliedt talk contribs 212 bytes −133 No edit summary
• curprev 10:0810:08, 29 October 2012 Terry Gliedt talk contribs 345 bytes +345 Created page with 'Login as a normal user (not as root) and do: # Test the aligner (fast, about 3 minutes) /usr/local/biopipe/bin/gen_biopipeline.pl --test ~/testalign rm -rf ~/testalign …'