Difference between revisions of "Main Page"
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Welcome to our brand new wiki! | Welcome to our brand new wiki! | ||
| − | For basic instructions, see [[ | + | For basic instructions, see [[http://en.wikipedia.org/wiki/Wikipedia:Tutorial the Wikipedia Tutorial]]. |
| − | + | == Sequence Analysis Tools == | |
| − | + | We are developing several tools for the analysis of next generation sequence data. | |
| − | + | === Read Mapping === | |
[[Karma|Karma]] - Our fast short read aligner | [[Karma|Karma]] - Our fast short read aligner | ||
[[Karma-colorspace|Karma-ColorSpace]] - QUICKSTART on mapping color space reads | [[Karma-colorspace|Karma-ColorSpace]] - QUICKSTART on mapping color space reads | ||
| + | |||
| + | === Variant Calling === | ||
| + | |||
| + | [[glfSingle]] - Variant calling for a single, deeply sequenced individual | ||
| + | [[glfTrio]] - Variant calling for a single, deeply sequence nuclear family with two parents and one child | ||
| + | [[glfMultiples]] -- Variant calling for multiple, unrelated individuals | ||
Revision as of 18:59, 14 November 2009
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Abecasis Group Wiki
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Welcome!
Welcome to our brand new wiki!
For basic instructions, see [the Wikipedia Tutorial].
Sequence Analysis Tools
We are developing several tools for the analysis of next generation sequence data.
Read Mapping
Karma - Our fast short read aligner
Karma-ColorSpace - QUICKSTART on mapping color space reads
Variant Calling
glfSingle - Variant calling for a single, deeply sequenced individual glfTrio - Variant calling for a single, deeply sequence nuclear family with two parents and one child glfMultiples -- Variant calling for multiple, unrelated individuals
