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Welcome to our brand new wiki!
 
Welcome to our brand new wiki!
  
For basic instructions, see [[http://en.wikipedia.org/wiki/Wikipedia:Tutorial the Wikipedia Tutorial]].
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For basic instructions, see [http://en.wikipedia.org/wiki/Wikipedia:Tutorial the Wikipedia Tutorial].
  
 
== Sequence Analysis Tools ==
 
== Sequence Analysis Tools ==

Revision as of 00:04, 15 November 2009

Abecasis Group Wiki


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Welcome!

Welcome to our brand new wiki!

For basic instructions, see the Wikipedia Tutorial.

Sequence Analysis Tools

We are developing several tools for the analysis of next generation sequence data.

Read Mapping

Karma - Our fast short read aligner

Karma-ColorSpace - QUICKSTART on mapping color space reads

Variant Calling

glfSingle - Variant calling for a single, deeply sequenced individual

glfTrio - Variant calling for a single, deeply sequence nuclear family with two parents and one child

glfMultiples -- Variant calling for multiple, unrelated individuals