Main Page: Difference between revisions
From Genome Analysis Wiki
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 12: | Line 12: | ||
Welcome to our brand new wiki! | Welcome to our brand new wiki! | ||
For basic instructions, see [[ | For basic instructions, see [[http://en.wikipedia.org/wiki/Wikipedia:Tutorial the Wikipedia Tutorial]]. | ||
== Sequence Analysis Tools == | |||
We are developing several tools for the analysis of next generation sequence data. | |||
=== Read Mapping === | |||
[[Karma|Karma]] - Our fast short read aligner | [[Karma|Karma]] - Our fast short read aligner | ||
[[Karma-colorspace|Karma-ColorSpace]] - QUICKSTART on mapping color space reads | [[Karma-colorspace|Karma-ColorSpace]] - QUICKSTART on mapping color space reads | ||
=== Variant Calling === | |||
[[glfSingle]] - Variant calling for a single, deeply sequenced individual | |||
[[glfTrio]] - Variant calling for a single, deeply sequence nuclear family with two parents and one child | |||
[[glfMultiples]] -- Variant calling for multiple, unrelated individuals | |||
Revision as of 18:59, 14 November 2009
|
Abecasis Group Wiki
|
Welcome!
Welcome to our brand new wiki!
For basic instructions, see [the Wikipedia Tutorial].
Sequence Analysis Tools
We are developing several tools for the analysis of next generation sequence data.
Read Mapping
Karma - Our fast short read aligner
Karma-ColorSpace - QUICKSTART on mapping color space reads
Variant Calling
glfSingle - Variant calling for a single, deeply sequenced individual glfTrio - Variant calling for a single, deeply sequence nuclear family with two parents and one child glfMultiples -- Variant calling for multiple, unrelated individuals
