Main Page: Difference between revisions
From Genome Analysis Wiki
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 27: | Line 27: | ||
[[glfSingle]] - Variant calling for a single, deeply sequenced individual | [[glfSingle]] - Variant calling for a single, deeply sequenced individual | ||
[[glfTrio]] - Variant calling for a single, deeply sequence nuclear family with two parents and one child | [[glfTrio]] - Variant calling for a single, deeply sequence nuclear family with two parents and one child | ||
[[glfMultiples]] -- Variant calling for multiple, unrelated individuals | [[glfMultiples]] -- Variant calling for multiple, unrelated individuals | ||
Revision as of 19:00, 14 November 2009
|
Abecasis Group Wiki
|
Welcome!
Welcome to our brand new wiki!
For basic instructions, see [the Wikipedia Tutorial].
Sequence Analysis Tools
We are developing several tools for the analysis of next generation sequence data.
Read Mapping
Karma - Our fast short read aligner
Karma-ColorSpace - QUICKSTART on mapping color space reads
Variant Calling
glfSingle - Variant calling for a single, deeply sequenced individual
glfTrio - Variant calling for a single, deeply sequence nuclear family with two parents and one child
glfMultiples -- Variant calling for multiple, unrelated individuals
