User contributions for Zhanxw

14 February 2012

• 12:3412:34, 14 February 2012 diff hist +1 QPLOT →Gallery of examples
• 12:3312:33, 14 February 2012 diff hist −4 QPLOT →Usage
• 12:3012:30, 14 February 2012 diff hist +281 QPLOT →Introduction
• 12:2912:29, 14 February 2012 diff hist +44 QPLOT No edit summary
• 12:1412:14, 14 February 2012 diff hist +41 m QPLOT →Where to Find It
• 12:1312:13, 14 February 2012 diff hist +398 m QPLOT →Where to Find It
• 12:0212:02, 14 February 2012 diff hist +2 QPLOT →Command line
• 12:0212:02, 14 February 2012 diff hist −8 QPLOT →Example
• 00:0800:08, 14 February 2012 diff hist +1,310 QPLOT →Example
• 00:0200:02, 14 February 2012 diff hist 0 N File:WrongBarCoding.pdf No edit summary current
• 00:0200:02, 14 February 2012 diff hist 0 N File:WrongBaseQual.pdf No edit summary current

13 February 2012

• 23:4623:46, 13 February 2012 diff hist +2,551 QPLOT No edit summary
• 23:4423:44, 13 February 2012 diff hist 0 N File:Qplot.Pool.9847.pdf No edit summary current
• 23:3823:38, 13 February 2012 diff hist 0 N File:Qplot.pdf No edit summary current
• 23:0623:06, 13 February 2012 diff hist +99 m QPLOT →Output files
• 23:0223:02, 13 February 2012 diff hist +86 QPLOT →Parameters
• 22:5622:56, 13 February 2012 diff hist +5 m QPLOT →Input files
• 20:1220:12, 13 February 2012 diff hist +50 QPLOT →Binary Download
• 20:1120:11, 13 February 2012 diff hist +63 QPLOT →Binary Download
• 20:0920:09, 13 February 2012 diff hist +495 QPLOT →Where to Find It

16 January 2012

• 23:0923:09, 16 January 2012 diff hist −169 QPLOT No edit summary
• 23:0823:08, 16 January 2012 diff hist +3 Template:ToolGitRepo Undo revision 4263 by Zhanxw (Talk)
• 23:0723:07, 16 January 2012 diff hist −3 Template:ToolGitRepo →Downloading From GitHub Without Git

21 November 2011

• 16:2016:20, 21 November 2011 diff hist +194 Talk:QPLOT No edit summary current

31 October 2011

• 15:0615:06, 31 October 2011 diff hist +8 UMAKE →Common Problems
• 15:0515:05, 31 October 2011 diff hist +652 UMAKE →Software Components

27 September 2011

• 16:2716:27, 27 September 2011 diff hist −26 LiftOver No edit summary

23 September 2011

• 23:3923:39, 23 September 2011 diff hist +3 LiftOver No edit summary
• 23:3723:37, 23 September 2011 diff hist +489 LiftOver No edit summary

29 August 2011

• 13:5313:53, 29 August 2011 diff hist +5 Talk:QPLOT No edit summary
• 13:5313:53, 29 August 2011 diff hist +2,525 N Talk:QPLOT Created page with 'Qplot process each aligned bam files. (1) Empirical vs reported Phred score: Conditioning on the reported base quality, we count the total time of bases that matches or not match…'

10 August 2011

• 11:3411:34, 10 August 2011 diff hist +29 LiftOver →Resources
• 11:3411:34, 10 August 2011 diff hist +3,973 N LiftMap.py Created page with '<source lang="python"> #!/usr/bin/python import sys, os def usage(): print("%s -m old.map -p old.ped -d old.dat -o new.prefix" % sys.argv[0] ) print("lift old.map (optio…'
• 11:3311:33, 10 August 2011 diff hist −21 LiftRsNumber.py No edit summary current
• 11:3111:31, 10 August 2011 diff hist +1,833 N LiftRsNumber.py Created page with '<syntaxhighlight lang="python"> #!/usr/bin/python import sys, os def usage(): print("%s file: lift over rs number. " % sys.argv[0] ) print("file should look like:") …'
• 11:2411:24, 10 August 2011 diff hist +123 LiftOver No edit summary
• 11:2311:23, 10 August 2011 diff hist +4,853 LiftOver No edit summary
• 11:1711:17, 10 August 2011 diff hist +4 Minimac: 1000 Genomes Imputation Cookbook →Your Own Data
• 11:1711:17, 10 August 2011 diff hist +3 Minimac: 1000 Genomes Imputation Cookbook →Your Own Data
• 11:1611:16, 10 August 2011 diff hist +117 Minimac: 1000 Genomes Imputation Cookbook →Your Own Data

9 August 2011

• 11:4911:49, 9 August 2011 diff hist +4,316 LiftOver No edit summary

8 August 2011

• 17:1117:11, 8 August 2011 diff hist +4,351 N LiftOver Created page with 'LiftOver LiftOver is a necesary step to bring all genetical analysis back to the same reference build. Particularly, our current data are mainly in either NCBI build 36 (UCSC h…'

12 July 2011

• 10:0410:04, 12 July 2011 diff hist +155 UMAKE →Exercise with Example Resources

29 June 2011

• 10:2410:24, 29 June 2011 diff hist +243 Introduction to new students →Unix

29 September 2010

• 22:0322:03, 29 September 2010 diff hist +200 Tramp →Where to get it

27 August 2010

• 04:3504:35, 27 August 2010 diff hist +50 BaseQualityCheck No edit summary current

15 July 2010

• 17:3317:33, 15 July 2010 diff hist +1,194 N Introduction to new students Created page with 'Introduction to New Students * R/C++/perl/python code snipplets / toy examples of various packages [[https://statgen.sph.umich.edu/wiki/Category:Code_Samples Internal Resources…'

13 May 2010

• 01:1401:14, 13 May 2010 diff hist +393 Karma →Optional flags
• 00:0000:00, 13 May 2010 diff hist 0 BaseQualityCheck No edit summary
• 00:0000:00, 13 May 2010 diff hist +163 BaseQualityCheck No edit summary