User contributions for Bingshan

16 April 2013

• 02:0702:07, 16 April 2013 diff hist +250 Polymutt →Download
• 02:0602:06, 16 April 2013 diff hist +241 Polymutt →Updates
• 01:0601:06, 16 April 2013 diff hist 0 MutationFilter →6. Filter based on low Map Quality (LMQ): filtered if the percentage of reads carrying the mutant allele with low Map quality (defined as map quality below 10 via --low_mapq_cutoff) is >=15% current
• 01:0401:04, 16 April 2013 diff hist 0 File:Mutfilter.tar.gz uploaded a new version of "File:Mutfilter.tar.gz"

12 April 2013

• 13:3813:38, 12 April 2013 diff hist −22 MutationFilter →Download
• 13:3813:38, 12 April 2013 diff hist 0 N File:Mutfilter.tar.gz No edit summary
• 13:3813:38, 12 April 2013 diff hist +105 MutationFilter No edit summary
• 12:0112:01, 12 April 2013 diff hist +355 MutationFilter No edit summary

1 April 2013

• 14:3414:34, 1 April 2013 diff hist +37 MutationFilter No edit summary
• 14:3114:31, 1 April 2013 diff hist −4 MutationFilter No edit summary
• 14:3114:31, 1 April 2013 diff hist +95 MutationFilter No edit summary
• 14:2814:28, 1 April 2013 diff hist +14 MutationFilter No edit summary
• 14:2814:28, 1 April 2013 diff hist +2 MutationFilter No edit summary
• 14:2814:28, 1 April 2013 diff hist +1,120 MutationFilter No edit summary
• 14:1714:17, 1 April 2013 diff hist +648 MutationFilter No edit summary
• 14:1214:12, 1 April 2013 diff hist +379 MutationFilter No edit summary
• 14:0814:08, 1 April 2013 diff hist +364 MutationFilter No edit summary
• 14:0414:04, 1 April 2013 diff hist +47 MutationFilter No edit summary
• 14:0214:02, 1 April 2013 diff hist +523 MutationFilter No edit summary
• 13:5813:58, 1 April 2013 diff hist +21 MutationFilter No edit summary
• 13:5813:58, 1 April 2013 diff hist +48 MutationFilter No edit summary
• 13:5613:56, 1 April 2013 diff hist +12 MutationFilter No edit summary
• 13:5613:56, 1 April 2013 diff hist −84 MutationFilter No edit summary
• 13:5313:53, 1 April 2013 diff hist +1,015 MutationFilter No edit summary
• 13:3813:38, 1 April 2013 diff hist +973 MutationFilter No edit summary
• 13:3213:32, 1 April 2013 diff hist +259 MutationFilter No edit summary
• 13:2813:28, 1 April 2013 diff hist +1,790 N MutationFilter Created page with ' == Introduction == * The tool '''mutfilter''' generates various diagnosis statistics based on sequence alignment and filters alignment artifacts based on user-provided criteria.…'

29 March 2013

• 11:5311:53, 29 March 2013 diff hist 0 File:Triodenovo.v0.01.tar.gz uploaded a new version of "File:Triodenovo.v0.01.tar.gz" current
• 11:5211:52, 29 March 2013 diff hist 0 File:Triodenovo.v0.01.tar.gz uploaded a new version of "File:Triodenovo.v0.01.tar.gz"
• 11:4911:49, 29 March 2013 diff hist 0 File:Triodenovo.tar.gz uploaded a new version of "File:Triodenovo.tar.gz" current
• 11:4911:49, 29 March 2013 diff hist 0 N File:Triodenovo.v0.01.binary.tar.gz No edit summary current
• 11:4811:48, 29 March 2013 diff hist +13 Triodenovo No edit summary
• 11:3611:36, 29 March 2013 diff hist 0 N File:Triodenovo.v0.01.tar.gz No edit summary
• 11:3611:36, 29 March 2013 diff hist +10 Triodenovo No edit summary

28 March 2013

• 00:0100:01, 28 March 2013 diff hist 0 N File:Triodenovo.gz No edit summary current
• 00:0000:00, 28 March 2013 diff hist −4 Triodenovo No edit summary

27 March 2013

• 23:5923:59, 27 March 2013 diff hist +85 Triodenovo No edit summary

25 March 2013

• 14:3014:30, 25 March 2013 diff hist 0 File:Triodenovo.tar.gz uploaded a new version of "File:Triodenovo.tar.gz"
• 13:4113:41, 25 March 2013 diff hist 0 N File:Triodenovo.tar.gz No edit summary
• 13:4013:40, 25 March 2013 diff hist +45 N Triodenovo Created page with ' download here.'

17 March 2013

• 12:4212:42, 17 March 2013 diff hist 0 N File:Polymutt precompiled.tar.gz No edit summary current
• 12:4212:42, 17 March 2013 diff hist +85 Polymutt beta No edit summary current

14 March 2013

• 11:3311:33, 14 March 2013 diff hist 0 N File:Polymutt.0.14.tar.gz No edit summary current
• 11:3111:31, 14 March 2013 diff hist +49 N Polymutt beta Created page with ' downloaded here.'

28 February 2013

• 18:0818:08, 28 February 2013 diff hist +3 BamPileup No edit summary current
• 18:0818:08, 28 February 2013 diff hist +40 BamPileup No edit summary
• 18:0718:07, 28 February 2013 diff hist 0 N File:BamPileup.tar.gz No edit summary current
• 18:0618:06, 28 February 2013 diff hist −4 BamPileup →Download
• 18:0518:05, 28 February 2013 diff hist +30 BamPileup →Download
• 18:0118:01, 28 February 2013 diff hist +432 N BamPileup Created page with '==Simple pileup tool to check the reads covering specific regions/sites ==Download== The following parameters are available. Ones with "[]" are in effect: Input Files : --b…'