GotCloud: Alignment Pipeline

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Revision as of 10:08, 29 October 2012 by Terry Gliedt (talk | contribs) (Created page with 'Login as a normal user (not as root) and do: # Test the aligner (fast, about 3 minutes) /usr/local/biopipe/bin/gen_biopipeline.pl --test ~/testalign rm -rf ~/testalign …')
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Login as a normal user (not as root) and do: 

#   Test the aligner (fast, about 3 minutes)
/usr/local/biopipe/bin/gen_biopipeline.pl --test ~/testalign
rm -rf ~/testalign              # If no error

#   Test umake  (longer, about 15 minutes)
/usr/local/biopipe/bin/umake.pl --test ~/testumake
rm -rf ~/testumake              # If no error
Retrieved from "http://genome.sph.umich.edu/w/index.php?title=GotCloud:_Alignment_Pipeline&oldid=5666"