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** <S>include links from the main library page and the SamFile page.</s>
 
** <S>include links from the main library page and the SamFile page.</s>
 
** <S>look into why the one example have two if checks on SamIn status</s> <span style="color:blue">- one was printing the result and one was setting the return value - cleaned up to be in one if statement.</span>
 
** <S>look into why the one example have two if checks on SamIn status</s> <span style="color:blue">- one was printing the result and one was setting the return value - cleaned up to be in one if statement.</span>
* Create 1 library for all of our library code rather than having libcsg, libbam, libfqf separated.
+
* <S>Create 1 library for all of our library code rather than having libcsg, libbam, libfqf separated.</s>
** What should this library be called?
+
** <S>What should this library be called?</s> <span style="color:blue">- Created library: libstatgen and reorganized into a new repository: statgen.</span>
*** libdna
+
*** <S>libdna</s>
*** libdna++
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*** <S>libdna++</s>
*** libsequence++
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*** <S>libsequence++</s>
*** libDNA
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*** <S>libDNA</s>
*** libgenotype
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*** <S>libgenotype</s>
 
* Add an option by class that says whether or not to abort on failure.  (or even an option on each method)
 
* Add an option by class that says whether or not to abort on failure.  (or even an option on each method)
 
** This allows calling code to set that option and then not have to check for failures since the code it calls would abort on a failure.
 
** This allows calling code to set that option and then not have to check for failures since the code it calls would abort on a failure.

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