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** [[BamUtil: dumpIndex|'''dumpIndex''' - Dump a BAM index file into an easy to read text version]]
** [[BamUtil: dumpIndex|'''dumpIndex''' - Dump a BAM index file into an easy to read text version]]
** [[BamUtil: readReference|'''readReference''' - Print the reference string for the specified region]]
** [[BamUtil: readReference|'''readReference''' - Print the reference string for the specified region]]
*Additional Tools
** [[BamUtil: bam2FastQ|'''bam2FastQ''' - Convert the specified BAM file to fastQs]]
* Dummy/Example Tools:
* Dummy/Example Tools:
