From Genome Analysis Wiki
Jump to navigationJump to search
2 bytes removed
, 12:14, 14 November 2011
Line 56: |
Line 56: |
| | Leave the insertion, even if it results in a 70M3I27S | | | Leave the insertion, even if it results in a 70M3I27S |
| |- | | |- |
− | |Clip occurs at the first position of the read (the entire read is clipped), preceding insertions remain. | + | |Clip occurs at the first position of the read (the entire read is clipped) |
− | | Entire read is soft clipped, 0-based position is left as the original (not modified) | + | | Entire read is soft clipped, preceding insertions remain, 0-based position is left as the original (not modified) |
| |- | | |- |
| | Clip occurs before the read starts | | | Clip occurs before the read starts |
Line 65: |
Line 65: |
| | Nothing is clipped. The read is not changed. | | | Nothing is clipped. The read is not changed. |
| |} | | |} |
− |
| |
| | | |
| = Usage = | | = Usage = |