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CalcMatch (view source)

Revision as of 22:59, 22 June 2010

866 bytes added ,  22:59, 22 June 2010
→‎example command lines
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= example command lines =
 
= example command lines =
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  CalcMatch --trueped true.ped --truedat true.dat --impped imp.ped --impdat imp.dat -o CalcMatch.Output --byPerson
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Will generate CalcMatch.Output.bySNP (6 fields only) and CalcMatch.Output.byPerson.
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  CalcMatch --trueped true.ped --truedat true.dat --impped imp.ped --impdat imp.dat -o CalcMatch.Output --byGeno --byPerson
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Will generate CalcMatch.Output.bySNP (6+20 fields) and CalcMatch.Output.byPerson.
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  CalcMatch --trueped true.ped --truedat true.dat --impped imp.ped --impdat imp.dat -o CalcMatch.Output --accuracyByGeno --byPerson
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Will generate CalcMatch.Output.bySNP (6+6 fields only) and CalcMatch.Output.byPerson.
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  CalcMatch --trueped true.ped --truedat true.dat --impped imp.ped --impdat imp.dat -o CalcMatch.Output --accuracyByGeno --byGeno --byPerson
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Will generate CalcMatch.Output.bySNP (6+20+6 fields only) and CalcMatch.Output.byPerson.
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