Difference between revisions of "Creating an AMI on EC2"
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'''Notes About Creating a New EC2 AMI''' | '''Notes About Creating a New EC2 AMI''' | ||
| − | + | Back to parent [http://genome.sph.umich.edu/wiki/Pipelines] | |
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| − | + | The following are notes taken when creating the Amazon Machine Instance used for the CSG pipeline process. | |
| − | + | These notes assume you have already created an EC2 account and have the certificates and keys set up properly. | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
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| − | + | <code> | |
| + | Login to https://console.aws.amazon.com/ec2 | ||
| + | </code> | ||
| − | + | Pay attention to the region you are using, at least for now it seems any StarCluster activity must be in '''us-east-1'''. | |
| − | + | Launch a new instance which we will use to set up the software and ultimately save it as an AMI. | |
| − | Launch | ||
| − | |||
| − | |||
| + | <code> | ||
| + | EC2 DashBoard -> Launch Instance | ||
| + | Class Wizard | ||
| + | Ubuntu Server 12.04.1 LTS 64 bit | ||
| + | Instance type -> Micro, EC2, no preference # Memory size does not matter | ||
| + | Advanced Instance Options (take defaults) | ||
| + | Storage Device Configuration -> Edit | ||
| + | Change volume to 30G -> Save -> Continue # Storage size does not matter | ||
| + | Key Name = CSG 8G biopipe; ubuntu 12.04 | ||
| + | Create Key/Pair if you need to, Name the PEM and save the pem file for access by ssh | ||
| + | Choose a Security Group (take default) | ||
| + | Launch | ||
| + | No need to Create Status Check Alarms | ||
| + | No need to Create EBS Volumes | ||
| + | </code> | ||
Revision as of 09:37, 23 October 2012
Notes About Creating a New EC2 AMI
Back to parent [1]
The following are notes taken when creating the Amazon Machine Instance used for the CSG pipeline process.
These notes assume you have already created an EC2 account and have the certificates and keys set up properly.
Login to https://console.aws.amazon.com/ec2
Pay attention to the region you are using, at least for now it seems any StarCluster activity must be in us-east-1. Launch a new instance which we will use to set up the software and ultimately save it as an AMI.
EC2 DashBoard -> Launch Instance
Class Wizard
Ubuntu Server 12.04.1 LTS 64 bit
Instance type -> Micro, EC2, no preference # Memory size does not matter
Advanced Instance Options (take defaults)
Storage Device Configuration -> Edit
Change volume to 30G -> Save -> Continue # Storage size does not matter
Key Name = CSG 8G biopipe; ubuntu 12.04
Create Key/Pair if you need to, Name the PEM and save the pem file for access by ssh
Choose a Security Group (take default)
Launch
No need to Create Status Check Alarms
No need to Create EBS Volumes
ssh -i ~/.ssh/AWS/CSG.pem ubuntu@ec2-23-20-32-7.compute-1.amazonaws.com mkdir debs
scp dev/biopipe/*.deb dev/umake/*.deb root8g:debs
ssh -i ~/.ssh/AWS/CSG.pem ubuntu@ec2-23-20-32-7.compute-1.amazonaws.com
sudo dpkg -i debs/biopipe-align_0.6_amd64.deb Selecting previously unselected package biopipe-align. (Reading database ... 25372 files and directories currently installed.) Unpacking biopipe-align (from .../biopipe-align_0.6_amd64.deb) ... Setting up biopipe-align (0.6) ... Created symlink '/usr/local/bin/gen_biopipeline.pl' to make running the aligner easier.
- ============================================================
- 'java' is not installed, do 'sudo apt-get install java-common default-jre'
- ============================================================
- ============================================================
- 'make' is not installed, do 'sudo apt-get install make'
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- ============================================================
- 'libssl0.9.8' is not installed, do 'sudo apt-get install libssl0.9.8'
- ============================================================
- ============================================================
- '/usr/local/biopipe/test/align' does not exist so you cannot test this install
- Install it by doing 'sudo dpkg -i biopipe-test_*.deb'
- ============================================================
etc
If there were messages about missing packages, install them now
sudo apt-get install make libssl0.9.8 java-common default-jre
sudo dpkg -i debs/biopipe-testalign_0.6_amd64.deb
/usr/local/biopipe/bin/gen_biopipeline.pl --test ~/testalign
Create Image
Image Name csg-biopipe_instance Image Description: Image for CSG Biopipe instance Volume Size: 30GB Take defaults otherwise
See notice about
View pending image ami-d27ec7bb
AMI: Ubuntu Cloud Guest AMI ID ami-3d4ff254 (x86_64)
Name: Ubuntu Server 12.04.1 LTS
Description: Ubuntu Server 12.04.1 LTS with support available from Canonical (http://www.ubuntu.com/cloud/services). Edit AMI
Number of Instances: 1
Availability Zone: No Preference
Instance Type: Micro (t1.micro)
Instance Class: On Demand Edit Instance Details
EBS-Optimized: No
Monitoring: Disabled Termination Protection: Disabled
Tenancy: Default
Kernel ID: Use Default Shutdown Behavior: Stop
RAM Disk ID: Use Default
Network Interfaces:
Secondary IP Addresses:
User Data:
IAM Role: Edit Advanced Details
Key Pair Name: CSG Edit Key Pair
Security Group(s): sg-a098e9c8 Edit Firewall
Launch an AMI
EC2 DashBoard -> AMIs -> Select CSG instance -> Launch Instance
Launch Instances (take defaults)
Advanced Instance Options (take defaults)
Storage Device Configuration -> Edit
Change volume to 30G or whatever -> Continue
Instance Details
Key Name = test of instance
Create Key/Pair if you need to, Name the PEM (e.g. CSG) and save the CSG.pem file
Choose a Security Group (take dfeault)
sg-a098e9c8 - quick-start-1
Review -> Launch
