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269 bytes added
, 18:33, 8 February 2010
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| * Format | | * Format |
| both base space and color space | | both base space and color space |
− | both single end and paired end | + | both single end and paired end, and paired end reads are given insert size 1500. |
− | * Program | + | |
− | generator
| + | * Program (generator) |
| | | |
| Usage: | | Usage: |
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| delXX: Delete a random XX-length piece for a single read, or at the same position for a paired reads | | delXX: Delete a random XX-length piece for a single read, or at the same position for a paired reads |
| | | |
− | e.g. ./generator bs se exact -n 100 -l 35 | + | e.g. ./generator bs se exact -n 100 -l 35 |
| + | |
| + | * Output |
| + | Simulation file are named like: BS_SE_EXACT_1000000_35, meaning base space, single end, exact (no polymorphism), 1M reads, 35 bp per read. |
| + | For each read, the tag was named in a similar way to Sanger's. |