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26 bytes added
, 14:35, 17 November 2010
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| overwrites the printableErrors option. | | overwrites the printableErrors option. |
| --baseComposition : Print the Base Composition Statistics. | | --baseComposition : Print the Base Composition Statistics. |
− | --disableSeqIDCheck : Disable the unique sequence identifier check.
| + | --disableSeqIDCheck : Disable the unique sequence identifier check. |
− | Use this option to save memory since the sequence id
| + | Use this option to save memory since the sequence id |
− | check uses a lot of memory.
| + | check uses a lot of memory. |
− | Does not affect the printing of Base Composition Statistics.
| + | --params : Print the parameter settings. |
| --quiet : Suppresses the display of errors and summary statistics. | | --quiet : Suppresses the display of errors and summary statistics. |
| Does not affect the printing of Base Composition Statistics. | | Does not affect the printing of Base Composition Statistics. |
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| === Examples === | | === Examples === |
| ./fastQValidator --file testFile.txt | | ./fastQValidator --file testFile.txt |
− | ./fastQValidator --file testFile.txt --minReadLen 10 --baseSpace --printableErrors 100 | + | ./fastQValidator --file testFile.txt --minReadLen 10 --baseSpace --printableErrors 100 --params |
− | ./fastQValidator --file test/testFile.txt --minReadLen 10 --colorSpace --ignoreErrors | + | ./fastQValidator --file test/testFile.txt --minReadLen 10 --colorSpace --ignoreErrors --disableSeqIDCheck |
| | | |
| === Return Value === | | === Return Value === |