Genotype Likelihood Based Allele Balance
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Revision as of 15:17, 22 October 2010 by Goncalo (talk | contribs) (Created page with 'A statistic developed by Dr. Tom Blackwell. == Inputs == ; '''depth''' : at each site ; lrr : phred-scaled likelihood of observed bases given reference genotype ; lsr : phr…')
A statistic developed by Dr. Tom Blackwell.
Inputs
- depth
- at each site
- lrr
- phred-scaled likelihood of observed bases given reference genotype
- lsr
- phred-scaled likelihood of observed bases given heterozygous genotype
- lss
- phred-scaled likelihood of observed bases given non-reference genotype