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Revision as of 13:19, 6 October 2014
, 13:19, 6 October 2014→GotCloud Reference Files
The chromosome 20 reference files required for the tutorial are included with the tutorial example data in $GCDATA/chr20Ref/.
The chromosome 20 reference files required for the tutorial are included with the tutorial example data in $GCDATA/chr20Ref/.
If you are running more than just chromosome 20, you will need whole genome reference files which can be downloaded from [[GotCloudReference]].
If you are running more than just chromosome 20, you will need whole genome reference files which can be downloaded from [[GotCloud: Genetic Reference and Resource Files]].
If you are using these reference files, you will only need to specify REF_DIR in your configuration file to the full path to where they are installed.
If you are using these reference files, you will only need to specify REF_DIR in your configuration file to the full path to where they are installed.
'''Genome sequence reference file'''
'''Genome sequence reference file'''
