Difference between revisions of "Introduction to new students"
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Group Chat [[https://statgen.sph.umich.edu/wiki/Instant_Messaging instant Messaging]] | Group Chat [[https://statgen.sph.umich.edu/wiki/Instant_Messaging instant Messaging]] | ||
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| + | == Lecture Materials == | ||
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| + | Lecture Notes for Goncalo's Introductory Genetics Course [[Biostatistics 666]] | ||
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| + | Web-seminars on next generation sequencing and related topics [http://www.newton.ac.uk/programmes/CGR/seminars/index.html Newton Institute Workshop] | ||
Revision as of 20:24, 15 July 2010
Introduction to New Students
Programming
- R/C++/perl/python code snipplets / toy examples of various packages
- How to use git
Git is a version control software. We have useful library codes and useful applications (see Sequence Analysis Tools section in [[1]]). A dedicated introduction page is here: [How to use git]
Unix
CSG Documentation [AWK, BASH, UNIX commands and etc.]
Tools
Samtools [Manual]
PLINK [Homepage]
MERLIN [Homepage]
BWA[Homepage ]
Resources
Nex-Gen Sequencing (NGS)
SEQAnswer forum [Homepage ]
RNAseq blog [Homepage ]
SAM/VCF format documentation
Group Chat [instant Messaging]
Lecture Materials
Lecture Notes for Goncalo's Introductory Genetics Course Biostatistics 666
Web-seminars on next generation sequencing and related topics Newton Institute Workshop
