Changes

*Geno file: genotypes of reference panels. (See [[#Geno file|Geno file]] to understand geno file format)

*Geno file: genotypes of reference panels. (See [[#Geno file|Geno file]] to understand geno file format)

In coord files of reference, LASER calculated the Principal Component Analysis (PCA) results of the reference samples; In coord files of sequencing samples, LASER infers their ancestries by placing their ancestry coordinates on the reference coordinates.  

In coord files of reference (Reference.coord), LASER outputs the result of Principal Component Analysis (PCA) of the reference samples; in coord files of sequencing samples(AllSamples.coord), LASER infers their ancestries by placing their ancestry coordinates based on the reference coordinates.  

An example result is shown below:

 

An example result (Seis shown below:

  popID  indivID  L1    Ci        t        PC1      PC2

  popID  indivID  L1    Ci        t        PC1      PC2