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! width=""|Method Name
! width=""|Method Name
! width=""|Description
! width=""|Description
|-
| bool IsEOF()
| bool: true if the end of file has been reached, false if not.
|-
|-
| bool OpenForRead(const char* filename)
| bool OpenForRead(const char* filename)
Determines if it is a BAM/SAM file by reading the beginning of the file.
Determines if it is a BAM/SAM file by reading the beginning of the file.
Returns true if successfully opened reading, false if not.
Returns true if successfully opened reading, false if not.
|-
|-
| bool OpenForWrite(const char * filename)
| bool OpenForWrite(const char * filename)
}
}
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== Setting fields in a SAM/BAM Header ==
== Setting fields in a SAM/BAM Header ==
