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=== Raw Sequence Line ===
=== Raw Sequence Line ===
{| class="wikitable" border="1"
|-
! Validation Criteria
! Error Message
|-
| A base sequence should have non-zero length.
| ERROR on Line <current line #>:
|-
| All characters in the base sequence must be in the allowable set specified via configuration.
* Base Only: A C T G N a c t g n
* Color Space Only: 0 1 2 3 .(period)
* Base or Color Space: A C T G N a c t g n 0 1 2 3 .(period)
| ERROR on Line <current line #>:
|-
| Reads should be of a minimum length; many mappers will get into trouble with very short reads.
| ERROR on Line <current line #>:
|}
=== Plus Line ===
=== Plus Line ===
=== Quality String Line ===
=== Quality String Line ===
=== Raw Sequence Line ===
{| class="wikitable" border="1"
|-
! Validation Criteria
! Error Message
|-
| A quality string should be present for every base sequence.
| ERROR on Line <current line #>:
|-
| Paired quality and base sequences should be of the same length.
| ERROR on Line <current line #>:
|-
| Valid quality values should all have ASCII codes > 32.
| ERROR on Line <current line #>:
|}
== Additional Features ==
== Additional Features ==
