Difference between revisions of "LibStatGen Download"

From Genome Analysis Wiki
Jump to navigationJump to search
Line 2: Line 2:
 
[[Category:C++]]
 
[[Category:C++]]
 
[[Category:libStatGen]]
 
[[Category:libStatGen]]
 
  
 
== Download ==
 
== Download ==
Click the link to download the tar of the statgen library and tools: [[Media:StatGen.0.1.1.tgz|StatGen.0.1.1.tgz]]
+
Click the link to download the tar of the statgen library and tools: [[Media:StatGen.0.1.1.tgz|StatGen.0.1.1.tgz]] - Released 11/09/2010
  
 
'''If you use this software, please e-mail me, Mary Kate Trost, at mktrost@umich.edu'''
 
'''If you use this software, please e-mail me, Mary Kate Trost, at mktrost@umich.edu'''
Line 13: Line 12:
 
To install, unpack the downloaded file (tar xvf) and type make.  
 
To install, unpack the downloaded file (tar xvf) and type make.  
  
=== Current Release Notes ===
+
=== Notes ===
* Added QPLOT to the release
+
* This software requires zlib to be installed on your machines.
* Made lib/general/StringBasics.h method IsEmpty const
+
 
* Removed an unimplemented method from GlfRecord.h
+
* '''Current Release Notes''' (11/17/2010)
 +
** FASTQ
 +
*** Add option to disable the unique sequence identifier check since that uses a lot of memory.
 +
** GLF
 +
*** Automatically write the End Maker record when writing GLF files.
 +
*** Add capability of consuming records to get to the next reference section.
 +
*** Fixed bug in writing GLF records of type 2.
 +
** Other
 +
*** Remove ZLIB from being contained within the repository
 +
 
 +
=== Problems in Current Release ===
 +
Let me know if you experience any of these problems as we may already have a fix you can use:
 +
 
 +
* None reported yet.
 +
 
 +
=== Fixes that will be in the next release ===
 +
If you need any of these fixes prior to the next release, let me know.
  
 
=== Previous Versions ===
 
=== Previous Versions ===
* [[Media:StatGen.0.1.0.tgz|StatGen.0.1.0.tgz]]
+
* [[Media:StatGen.0.1.1.tgz|StatGen.0.1.1.tgz]] - Released 11/09/2010
 +
**Added QPLOT to the release
 +
** Made lib/general/StringBasics.h method IsEmpty const
 +
** Removed an unimplemented method from GlfRecord.h
 +
* [[Media:StatGen.0.1.0.tgz|StatGen.0.1.0.tgz]] - Released 11/02/2010
 
** Original version.
 
** Original version.

Revision as of 14:17, 17 November 2010


Download

Click the link to download the tar of the statgen library and tools: StatGen.0.1.1.tgz - Released 11/09/2010

If you use this software, please e-mail me, Mary Kate Trost, at mktrost@umich.edu

This version is recommended for Unix users with access to the GNU C++ compiler.

To install, unpack the downloaded file (tar xvf) and type make.

Notes

  • This software requires zlib to be installed on your machines.
  • Current Release Notes (11/17/2010)
    • FASTQ
      • Add option to disable the unique sequence identifier check since that uses a lot of memory.
    • GLF
      • Automatically write the End Maker record when writing GLF files.
      • Add capability of consuming records to get to the next reference section.
      • Fixed bug in writing GLF records of type 2.
    • Other
      • Remove ZLIB from being contained within the repository

Problems in Current Release

Let me know if you experience any of these problems as we may already have a fix you can use:

  • None reported yet.

Fixes that will be in the next release

If you need any of these fixes prior to the next release, let me know.

Previous Versions

  • StatGen.0.1.1.tgz - Released 11/09/2010
    • Added QPLOT to the release
    • Made lib/general/StringBasics.h method IsEmpty const
    • Removed an unimplemented method from GlfRecord.h
  • StatGen.0.1.0.tgz - Released 11/02/2010
    • Original version.