Changes

LiftOver can have three use cases:  

LiftOver can have three use cases:  

(1) [[#Lift genome positions | convert genome position from one genome assembly to another genome assembly]]

(1) [[#Lift genome positions | Convert genome position from one genome assembly to another genome assembly]]

 

In most scenarios, we have known genome positions in NCBI build 36 (UCSC hg 18) and hope to lift them over to NCBI build 37 (UCSC hg19).

In most scenarios, we have known genome positions in NCBI build 36 (UCSC hg 18) and hope to lift them over to NCBI build 37 (UCSC hg19).

(2) [[#Lift dbSNP rs numbers | convert dbSNP rs number from one build to another]]

(2) [[#Lift dbSNP rs numbers | Convert dbSNP rs number from one build to another]]

 

(3) [[#Lift Merlin/PLINK format | Convert both genome position and dbSNP rs number over different versions]]

It is likely to see such type of data in Merlin/PLINK format.

It is likely to see such type of data in Merlin/PLINK format.