Difference between revisions of "METAL"
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| − | METAL is a program that facilitates the meta-analysis of genomewide association scans. | + | [[Category:Software]] |
| + | '''METAL''' is a program that facilitates the meta-analysis of genomewide association scans ([http://www.sph.umich.edu/csg/abecasis/publications/pdf/Bioinformatics.vol.26-pp.2190.pdf manuscript available here]). It was first developed by Goncalo Abecasis, Yun Li and Cristen Willer. Early versions were used for the analyses presented in [http://www.sph.umich.edu/csg/abecasis/publications/18193045.html Sanna et al (2008)] and [http://www.sph.umich.edu/csg/abecasis/publications/18193043.html Willer et al (2008)]. Since then, METAL has become quite a popular tool for the analysis of genomewide association scans. | ||
== Useful Wiki Pages == | == Useful Wiki Pages == | ||
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There are a few pages in this Wiki that may be useful to METAL users. Here are links to a few: | There are a few pages in this Wiki that may be useful to METAL users. Here are links to a few: | ||
| − | * The [METAL FAQ] | + | * The [[METAL FAQ]] |
| − | * The [METAL Command | + | * The [[METAL Command Reference]] |
| + | |||
| + | * The [[METAL Documentation]] | ||
| + | |||
| + | * The [[METAL Quick Start|METAL Quick Start Page]] '''Recommended for New Users!!''' | ||
| + | |||
| + | == Option Specific Pages == | ||
| + | |||
| + | Details of several options are available. Among those: | ||
| + | |||
| + | * [[METAL ADDFILTER|ADDFILTER]] | ||
| + | * [[METAL COLUMNCOUNTING|COLUMNCOUNTING]] | ||
| + | * [[METAL CUSTOMVARIABLE|CUSTOMVARIABLE]] | ||
| + | * [[METAL EFFECTLABEL|EFFECTLABEL]] | ||
| + | * [[METAL GENOMICCONTROL|GENOMICCONTROL]] | ||
| + | * [[METAL LOGPVALUE|LOGPVALUE]] | ||
| + | * [[METAL SOURCE|SOURCE]] | ||
| + | * [[METAL VERBOSE|VERBOSE]] | ||
== Download == | == Download == | ||
Latest revision as of 10:33, 25 March 2011
METAL is a program that facilitates the meta-analysis of genomewide association scans (manuscript available here). It was first developed by Goncalo Abecasis, Yun Li and Cristen Willer. Early versions were used for the analyses presented in Sanna et al (2008) and Willer et al (2008). Since then, METAL has become quite a popular tool for the analysis of genomewide association scans.
Useful Wiki Pages
There are a few pages in this Wiki that may be useful to METAL users. Here are links to a few:
- The METAL FAQ
- The METAL Quick Start Page Recommended for New Users!!
Option Specific Pages
Details of several options are available. Among those:
Download
To download Metal, go to the METAL website.
Related Programs
LocusZoom is a program that facilitates display of genomewide association scan results.
