http://genome.sph.umich.edu/w/index.php?title=METAL_VERBOSE&feed=atom&action=historyMETAL VERBOSE - Revision history2024-03-29T11:34:20ZRevision history for this page on the wikiMediaWiki 1.35.9http://genome.sph.umich.edu/w/index.php?title=METAL_VERBOSE&diff=893&oldid=prevGoncalo: Created page with 'The '''VERBOSE''' option is enabled with the <code>VERBOSE ON</code> command. When this option is enabled METAL will print details of each analyzed SNP for each input file. Unles…'2010-04-06T04:36:46Z<p>Created page with 'The '''VERBOSE''' option is enabled with the <code>VERBOSE ON</code> command. When this option is enabled METAL will print details of each analyzed SNP for each input file. Unles…'</p>
<p><b>New page</b></p><div>The '''VERBOSE''' option is enabled with the <code>VERBOSE ON</code> command. When<br />
this option is enabled METAL will print details of each analyzed SNP for each input<br />
file. Unless you use an appropriate [[METAL ADDFILTER|filter]], this option can easily generate<br />
an unmanageable amount of ouput.<br />
<br />
Details for each SNP will be output after aligning alleles and strands to the same strand,<br />
but before any genomic control correction is applied. In sample size based analysis, the<br />
sample size, z-score and p-value will be output. In standard error based analyses, effect<br />
sizes and standard errors are output instead. In either case, allele frequency information<br />
will also be output if available.</div>Goncalo