Page history
26 November 2010
22 September 2010
29 August 2010
17 June 2010
9 June 2010
4 June 2010
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-6
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m-3,481
→HapMap format reference files
+180
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+102
→FAQ
-7,695
→FAQ
-7
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+368
→Examples
-112
→Options
-148
→Parameter files
-28
→Input Files
+54
→Can I used unphased reference?
-7
→More questions?
+10
→How long does imputation take?
-42
25 May 2010
24 May 2010
→How do I get imputation quality estimates?
-56
→Does --mle overwrite input genotypes?
-3
→Does --mle overwrite fed-in genotypes?
+28
→Why and how to perform a 2-step imputation?
-3
→How is AL1 defined? Which allele dosage is .dose/.mldose counting?
-3
→How do I get reference files for an region of interest?
-3
→How do I get reference files for an region of interest?
-2
→How do I get reference files for an region of interest?
-6
→How do I get reference files for an region of interest?
-110
→Shall I apply QC before or after imputation? If so, how?
-7
→Shall I apply QC before or after imputation? If so, how?
-9
→Do I have to sort the pedigree file by physical positions?
+40
→What if I specified --states R where R exceeds the maximum possible (2*number diploid individuals - 2 + number_haplotypes)?
→Can I used unphased reference?
-536
→How is AL1 defined? Which allele dosage is .dose/.mldose counting?
+531
→How is AL1 defined? Which allele dosage is .dose/.mldose counting?
-20
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-71
→More questions?
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+107
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+2
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+1,162
