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mach1 -d sample.dat -p sample.ped -s chr20.snps -h chr20.hap --compact --greedy --autoFlip --errorMap par_infer.erate --crossoverMap par_infer.rec --mle --mldetails > mach.imp.log
mach1 -d sample.dat -p sample.ped -s chr20.snps -h chr20.hap --compact --greedy --autoFlip --errorMap par_infer.erate --crossoverMap par_infer.rec --mle --mldetails > mach.imp.log
=== '''Where can I find combined HapMap reference files? '''<br> A: http://www.sph.umich.edu/csg/yli/mach/download/HapMap-r21.html <br><br>
=== '''Where can I find combined HapMap reference files? ''' ===
A: http://www.sph.umich.edu/csg/yli/mach/download/HapMap-r21.html <br><br>
'''Q: Where can I find HapMap III reference files? '''
'''Q: Where can I find HapMap III reference files? '''
