Difference between revisions of "Main Page"
From Genome Analysis Wiki
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[[glfSingle]] - Variant calling for a single, deeply sequenced individual | [[glfSingle]] - Variant calling for a single, deeply sequenced individual | ||
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[[glfTrio]] - Variant calling for a single, deeply sequence nuclear family with two parents and one child | [[glfTrio]] - Variant calling for a single, deeply sequence nuclear family with two parents and one child | ||
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[[glfMultiples]] -- Variant calling for multiple, unrelated individuals | [[glfMultiples]] -- Variant calling for multiple, unrelated individuals | ||
Revision as of 19:00, 14 November 2009
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Abecasis Group Wiki
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Welcome!
Welcome to our brand new wiki!
For basic instructions, see [the Wikipedia Tutorial].
Sequence Analysis Tools
We are developing several tools for the analysis of next generation sequence data.
Read Mapping
Karma - Our fast short read aligner
Karma-ColorSpace - QUICKSTART on mapping color space reads
Variant Calling
glfSingle - Variant calling for a single, deeply sequenced individual
glfTrio - Variant calling for a single, deeply sequence nuclear family with two parents and one child
glfMultiples -- Variant calling for multiple, unrelated individuals
