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52 bytes added ,  21:50, 13 December 2010
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### Convert the pedigree file into a MaCH haplotype file (missing genotypes should be encoded as:  "0" or "." or "N" )
 
### Convert the pedigree file into a MaCH haplotype file (missing genotypes should be encoded as:  "0" or "." or "N" )
   −
### '''<Example of a pedigree file >'''
+
:::: '''<Example of a pedigree file >'''
###  FAM1003  ID1234  0  0  M  A/0  A/0  C/0
+
:::: FAM1003  ID1234  0  0  M  A/0  A/0  C/0
### FAM1004  ID5678  0  0  M  0/0  C/0  G/0
+
:::: FAM1004  ID5678  0  0  M  0/0  C/0  G/0
### ...
+
:::: ...
### '''<End of pedigree file>'''
+
:::: '''<End of pedigree file>'''
      −
  '''<Example of a phased haplotype file>'''
+
::::  '''<Example of the corresponding haplotype file>'''
  FAM1003->ID1234 HAPLO1 AAC
+
::::  FAM1003->ID1234 HAPLO1 AAC
  FAM1003->ID1234 HAPLO2 AAC
+
::::  FAM1003->ID1234 HAPLO2 AAC
  FAM1004->ID5678 HAPLO1 0CG
+
::::  FAM1004->ID5678 HAPLO1 0CG
  FAM1004->ID5678 HAPLO2 0CG
+
::::  FAM1004->ID5678 HAPLO2 0CG
  ...
+
::::  ...
  '''<End of phased haplotype file>'''
+
::::  '''<End of the corresponding haplotype file>'''
    
### Impute using minimac as described above.
 
### Impute using minimac as described above.
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