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Revision as of 18:54, 27 August 2012
, 18:54, 27 August 2012→X Chromosome Imputation
(reference haplotypes can be found [ftp://share.sph.umich.edu/1000genomes/fullProject/2012.03.14/GIANT.chrX.phase1_release_v3.20101123.snps_indels_svs.genotypes.refpanel.ALL.vcf.gz.tgz here])
(reference haplotypes can be found [ftp://share.sph.umich.edu/1000genomes/fullProject/2012.03.14/GIANT.chrX.phase1_release_v3.20101123.snps_indels_svs.genotypes.refpanel.ALL.vcf.gz.tgz here])
=== 1. Split the X chromosome pedigree file by sex ===
=== 1. Split X chromosome pedigree file by sex ===
# For females: follow the same protocol as for autosomes
# For females: follow the same protocol as for autosomes
