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12 bytes added ,  18:55, 10 April 2014
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== Compilation ==
 
== Compilation ==
 
*After downloading the source code, unzip and untar it, and cd polymutt2, and then type Make
 
*After downloading the source code, unzip and untar it, and cd polymutt2, and then type Make
*Two executables will be generated in bin/ directory: polymutt2 and vcf2map
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*Two executables will be generated in bin/ directory: '''polymutt2''' and '''vcf2map'''
 
* vcf2map is to prune LD and generate a map file with high quality SNPs
 
* vcf2map is to prune LD and generate a map file with high quality SNPs
 
* polymutt2 is to generate genotype calls taking a VCF file as input
 
* polymutt2 is to generate genotype calls taking a VCF file as input
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