From Genome Analysis Wiki
Jump to navigationJump to search
1 byte added
, 12:34, 14 February 2012
Line 178: |
Line 178: |
| | | |
| Here we show qplot can be applied in different sequencing scenarios. Also users can customize statistics generated by qplot in various formats. | | Here we show qplot can be applied in different sequencing scenarios. Also users can customize statistics generated by qplot in various formats. |
| + | |
| | | |
| * Whole genome sequencing with more than one lanes | | * Whole genome sequencing with more than one lanes |
− |
| |
| | | |
| Figures | | Figures |
Line 212: |
Line 212: |
| BaseComp_T(%) 26.8 27.1 26.8 27.3 26.9 | | BaseComp_T(%) 26.8 27.1 26.8 27.3 26.9 |
| BaseComp_O(%) 0.0 0.0 0.0 0.0 0.0 | | BaseComp_O(%) 0.0 0.0 0.0 0.0 0.0 |
| + | |
| | | |
| * Whole genome sequencing with 24-multiplexing | | * Whole genome sequencing with 24-multiplexing |
Line 219: |
Line 220: |
| | | |
| [[Media: qplot.Pool.9847.pdf | QPlot of 24 samples(PDF) ]] | | [[Media: qplot.Pool.9847.pdf | QPlot of 24 samples(PDF) ]] |
| + | |
| | | |
| * Interactive qplot | | * Interactive qplot |
Line 227: |
Line 229: |
| | | |
| [http://www-personal.umich.edu/~zhanxw/qplot.Pool.9847.html QPlot of 24 samples(HTML) ] | | [http://www-personal.umich.edu/~zhanxw/qplot.Pool.9847.html QPlot of 24 samples(HTML) ] |
− |
| |
| | | |
| == Diagnose sequencing quality == | | == Diagnose sequencing quality == |