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* The [[RAREFY | '''RAREFY Home''']]
* The [[RAREFY | '''RAREFY Home''']]
* The [[RAREFY_DOC | '''RAREFY Documentation''']]
* The [[RAREFY_DOC | '''RAREFY Documentation''']]
* The [[RAREFY_TUTORIAL | '''RAREFY Tutorial''']]
* The [[RAREFY_DOWNLOAD | '''RAREFY Download Page''']]
* The [[RAREFY_DOWNLOAD | '''RAREFY Download Page''']]
* The [[RAREFY_FAQ | '''FAQ''']]
* The [[RAREFY_FAQ | '''FAQ''']]
==Input Files==
==Input Files==
===--ped [string]===
===--ped [string]===
followed by the file name of your[http://www.sph.umich.edu/csg/abecasis/merlin/tour/input_files.html MERLIN format PED] file.
followed by the file name of your [http://www.sph.umich.edu/csg/abecasis/merlin/tour/input_files.html MERLIN format PED] file.
===--dat [string]===
===--dat [string]===
