Difference between revisions of "RAREFY DOCUMENTATION"

From Genome Analysis Wiki
Jump to navigationJump to search
Line 6: Line 6:
  
 
*'''RAREFY''' is able to handle large and complex pedigrees.
 
*'''RAREFY''' is able to handle large and complex pedigrees.
 +
 +
==INPUT FILE FORMAT==
 +
*'''RAREFY''' takes MERLIN format PED/DAT files as input, no MAP file is needed.
  
 
==SOFTWARE INTERFACE==
 
==SOFTWARE INTERFACE==
 
  
 
==EXAMPLES==
 
==EXAMPLES==

Revision as of 14:17, 3 February 2015

KEY FEATURES

  • RAREFY is a likelihood-based method to prioritize individuals in family samples and population samples.
  • RAREFY takes account familial relatedness and allows adjusting covariates.
  • RAREFY is able to handle large and complex pedigrees.

INPUT FILE FORMAT

  • RAREFY takes MERLIN format PED/DAT files as input, no MAP file is needed.

SOFTWARE INTERFACE

EXAMPLES