Difference between revisions of "RAREFY TUTORIAL"

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*Please download the [[Media:Rarefy.example.tar.gz | '''EXAMPLE''']] file to your directory.
 
*Please download the [[Media:Rarefy.example.tar.gz | '''EXAMPLE''']] file to your directory.
 
*In this example, 20,000 individuals in 4,000 nuclear families were simulated with 40% trait heritability.
 
*In this example, 20,000 individuals in 4,000 nuclear families were simulated with 40% trait heritability.
 +
*A variant with frequency 0.001 and effect size 2 SD was simulated in the sample. The variant was simulated to be trait-increasing.
  
 
==COMMAND==
 
==COMMAND==
  
 
==OUTPUT==
 
==OUTPUT==

Revision as of 04:25, 17 February 2015

Useful Wiki Pages

EXAMPLE DATA SET

  • Please download the EXAMPLE file to your directory.
  • In this example, 20,000 individuals in 4,000 nuclear families were simulated with 40% trait heritability.
  • A variant with frequency 0.001 and effect size 2 SD was simulated in the sample. The variant was simulated to be trait-increasing.

COMMAND

OUTPUT