Difference between revisions of "RAREMETAL"
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[[Category:Software]] | [[Category:Software]] | ||
| − | ''' | + | [[Category:RAREMETAL]] |
| + | '''RAREMETAL''' is a program that facilitates the meta-analysis of rare variants from genotype arrays or sequencing (manuscript in preparation). | ||
| + | It was developed by [[Shuang_Feng|Shuang Feng]], Dajiang Liu and Gonçalo R. Abecasis. RAREMETAL has been used for the analyses in Exomechip blood lipids consortium and [[EMADS|EMADS]]. | ||
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| + | If you feel the program is useful, please take one minute to tell us your name and email ([https://docs.google.com/spreadsheet/ccc?key=0AuYjznTeEDYudFpqUk9sQ2pkN3d3endjYldqMEp6ZUE&usp=sharing '''registration''']). Thank you! | ||
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| + | For questions please contact Andy Boughton via email: abought at umich dot edu. | ||
== Useful Wiki Pages == | == Useful Wiki Pages == | ||
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* The [[RAREMETALWORKER | RAREMETALWORKER documentation]] | * The [[RAREMETALWORKER | RAREMETALWORKER documentation]] | ||
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== Download and Build== | == Download and Build== | ||
| − | To download | + | To download RAREMETAL executable and source code with instruction of build, go to [[Rare-Metal#Download_and_Installation|'''DOWNLOAD and INSTALLATION''']]. |
== Related Programs == | == Related Programs == | ||
| + | [[RAREMETALWORKER]] is a program that does single variant association for sequencing and genotyping array data and generates summary statistics for meta-analysis in RAREMETAL. | ||
[[LocusZoom]] is a program that facilitates display of genomewide association scan results. | [[LocusZoom]] is a program that facilitates display of genomewide association scan results. | ||
| − | [[METAL]] is a program that facilitates meta-analysis of genomewide scans | + | [[METAL]] is a program that facilitates meta-analysis of single-variant genomewide scans. |
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Latest revision as of 17:52, 16 March 2018
RAREMETAL is a program that facilitates the meta-analysis of rare variants from genotype arrays or sequencing (manuscript in preparation). It was developed by Shuang Feng, Dajiang Liu and Gonçalo R. Abecasis. RAREMETAL has been used for the analyses in Exomechip blood lipids consortium and EMADS.
If you feel the program is useful, please take one minute to tell us your name and email (registration). Thank you!
For questions please contact Andy Boughton via email: abought at umich dot edu.
Useful Wiki Pages
There are a few pages in this Wiki that may be useful to RAREMETAL users. Here are links to a few:
- The RAREMETAL FAQ
Download and Build
To download RAREMETAL executable and source code with instruction of build, go to DOWNLOAD and INSTALLATION.
Related Programs
RAREMETALWORKER is a program that does single variant association for sequencing and genotyping array data and generates summary statistics for meta-analysis in RAREMETAL.
LocusZoom is a program that facilitates display of genomewide association scan results.
METAL is a program that facilitates meta-analysis of single-variant genomewide scans.
