Difference between revisions of "RAREMETAL"

From Genome Analysis Wiki
Jump to navigationJump to search
Line 24: Line 24:
 
[[METAL]] is a program that facilitates meta-analysis of genomewide scans.
 
[[METAL]] is a program that facilitates meta-analysis of genomewide scans.
  
[[RAREMETALWORKER]] is a program that does single variant association and generates summary statistics for meta-analysis using RAREMETAL.
+
[[RAREMETALWORKER]] is a program that does single variant association for sequencing and genotyping array data and generates summary statistics for meta-analysis using RAREMETAL.

Revision as of 12:42, 15 August 2013

rareMETAL is a program that facilitates the meta-analysis of rare variants from genotype arrays or sequencing (manuscript in preparation). It was developed by Shuang Feng, Dajiang Liu and Gonçalo Abecasis. Currently, rareMETAL is being used for the analyses in Exomechip lipids consortium and EMADS.

Useful Wiki Pages

There are a few pages in this Wiki that may be useful to RAREMETAL users. Here are links to a few:

Download and Build

To download rareMetal executable and source code with instruction of build, go to DOWNLOAD and INSTALLATION.

Related Programs

LocusZoom is a program that facilitates display of genomewide association scan results.

METAL is a program that facilitates meta-analysis of genomewide scans.

RAREMETALWORKER is a program that does single variant association for sequencing and genotyping array data and generates summary statistics for meta-analysis using RAREMETAL.