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, 18:45, 16 November 2012
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| === Unrelated individuals === | | === Unrelated individuals === |
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− | * Command are the same as in above example, except each individual has to have a distinct family ID in ped file. | + | * Command are the same as in above example, except each individual has to have a distinct family ID in ped file. |
| + | * When you have genotypes from ped and marker information from dat file, and assuming no relatedness in the sample: |
| + | |
| + | ./Rare-Metal-Worker --ped yours.ped --dat yours.dat |
| + | |
| + | * When you have genotypes from vcf and covariates and trait information saved in ped and dat file, assuming there is no relatedness in the sample, you should use the following: |
| + | |
| + | ./Rare-Metal-Worker --ped yours.ped --dat yours.dat --vcf yours.vcf.gz |
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| == Q & A == | | == Q & A == |