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==== Kinship Options ====
==== Kinship Options ====
* --kinMiss and --kinMaf should be used with --kinGeno together.
* --kinMiss and --kinMaf should be used with --kinGeno together.
* --kinMiss specifies the maximum genotype missing rate when calculating kinship from genotypes.
* --kinMiss specifies the maximum genotype missing rate when calculating kinship from genotypes. The default is 0.05.
* --kinMaf specifies the minimum minor allele frequency used when calculating kinship from genotypes.
* --kinMaf specifies the minimum minor allele frequency used when calculating kinship from genotypes. The default is 0.05.
==== Chromosome X ====
==== Chromosome X ====
