Difference between revisions of "RAREMETALWORKER SPECIAL TOPICS"
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* If --makeResiduals is used for adjusting covariates, then individuals with missing covariates will also be excluded. | * If --makeResiduals is used for adjusting covariates, then individuals with missing covariates will also be excluded. | ||
* Individuals that are not genotyped will also be excluded from analyses. | * Individuals that are not genotyped will also be excluded from analyses. | ||
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Revision as of 11:19, 14 April 2014
This page describes how RAREMETALWORKER handles some special cased during analyses.
RAREMETALWORKER generates single variant association test statistics for a single study prior to meta-analysis. This page provides a brief description of the statistics that RAREMETALWORKER calculates, together with key formulae.
Missing Data
- Individuals with missing phenotypes will be excluded from analysis.
- If --makeResiduals is used for adjusting covariates, then individuals with missing covariates will also be excluded.
- Individuals that are not genotyped will also be excluded from analyses.