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Revision as of 12:53, 14 April 2014
, 12:53, 14 April 2014→Trait Options
==Trait Options==
==Trait Options==
===--makeResiduals===
* If --makeResiduals is used, then covariates are adjusted before fitting linear models using residuals.
===--inverseNormal===
* If --inverseNormal is used, but not with --makeResiduals, then trait values are inverse normalized before fitting linear models.
* If --inverseNormal and --makeResiduals are used together, then covariates are adjusted and inverse normalized residuals are used to fit linear models.
===--traitName===
* --traitName takes a string of the trait name that you want to analyze.
* If this option is not used, then all traits included in [[RAREMETALWORKER#PED_and_DAT_Files | '''PED/DAT''']] files are analyzed.
==Model Options==
==Model Options==
