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Revision as of 13:13, 14 April 2014
, 13:13, 14 April 2014no edit summary
===--kinxFile===
===--kinxFile===
* --kinxFile must be used with --kinFile and --vcX.
* --kinxFile takes a string of file name of the previously saved GRM for chromosome X.
* If --kinxFile is not used, but --kinFile your.autosomal.Empirical.Kinship.gz --vcX are issued in a command line, then RAREMETALWORKER will look for a kinship X file named your.autosomal.Empirical.KinshipX.gz. If this file is still not found, a FATAL ERROR will occur.
===--kinSave===
===--kinSave===
*For formats of the saved genomic relationship matrix, please refer to [[RAREMETALWORKER#Genomic_Relationship_Matrix_.28GRM.29 | '''format''']].
*For formats of the saved genomic relationship matrix, please refer to [[RAREMETALWORKER#Genomic_Relationship_Matrix_.28GRM.29 | '''format''']].
