Changes

From Genome Analysis Wiki
Jump to navigationJump to search
Line 35: Line 35:  
* Description of dosage format in a VCF file can be found in [[RAREMETALWORKER#DOSAGE | '''dosage''']].
 
* Description of dosage format in a VCF file can be found in [[RAREMETALWORKER#DOSAGE | '''dosage''']].
 
===--noeof===
 
===--noeof===
* If you VCF file does not have the BGZF EOF markers, you should use --noeof option to let RAREMETALWORKER skip checking the BGZF EOF markers at the end of the file. Please see [[RAREMETAL_FAQ#error:_BGZF_EOF_marker_is_missing_in_xxx.vcf.gz | '''BGZF EOF''']] for more details.
+
* If you VCF file does not have the BGZF EOF markers, you should use --noeof option to let RAREMETALWORKER skip checking the BGZF EOF markers at the end of the file.  
 +
* Please see [[RAREMETAL_FAQ#error:_BGZF_EOF_marker_is_missing_in_xxx.vcf.gz | '''BGZF EOF''']] for more details.
    
==Output Files==
 
==Output Files==
2,004

edits

Navigation menu